In some occasions, you will have to write an essay in the extremely short amount of time on the exam in college or high school. Also, you may be a little bit of a procrastinator, and find yourself in a situation when the paper is due tomorrow morning, and you have not even chosen the topic yet. Even though a last-minute essay cannot look as great as a work prepared successively and carefully within the whole time given, you still have a chance to submit a decent paper. The working process will require your full attention and a lot of effort, even if you are assigned a simple essay. However, if you learn the next few tips, the essay writing will seem significantly easier and feasible even when you are short on time.

Firstly, clean up your working space to get started. Make sure you have everything you need on the table, take a pen, a few sticky notes, your laptop, and read through the assignment requirements. In case no prompt is given, search for good essay topics, and pick a few uncommon and interesting ones you will be able to write about. Making a final choice, think which topic is the most relevant to your current studies and will not take too much to research.

Afterwards, look for the most trustworthy sources or the ones you are certainly allowed to use. If you are not sure, access the online library or any free services where you can look for the books and articles for your essay. Use sticky notes to write down the information and put them in front of you to see how much data has been gathered and if you need to continue researching. Reread these notes from time to time and cross out the info you do not find relevant anymore.

When you have the data you need to produce a quality work, it is crucial to think about the structure of the future paper. If you are not sure how to write an essay outline properly, check what your essay type is first. Each type is organized differently, so you need to look up the structure every time you are given an essay homework. You can also search for an example of the essay on your topic, and adhere to its outline. No matter what kind of essay you are going to write, it is important to start with a thesis statement. It should declare what problem you will review in the paper, and which facts or arguments you will use to do it professionally. As these arguments will be discussed in the main part of the essay, outline the body paragraphs and put down a few sentences with the rough description of each paragraph. Think of the way you will engage the reader in the introduction, and which thought will be conclusive for the paper. When the direction of the work is clear from the outline, use it to draft the first version of the essay.

If you are not used to model essay writing, do not worry - your draft should not necessarily look like a masterpiece. It is only the depiction of your thoughts, and as you will have them written down, it will be easier to create a good essay. There is no best way to write an essay, so trust the working methods you usually use. You may like taking short breaks once in a few minutes, or write everything in one sit - just make sure to keep the focus on writing and avoid the urge to call a friend or watch something online. Thus, you will finish the paper faster, and will not feel guilty for engaging in other activities afterwards.

Do not forget to go through the essay a few times after the completion. Everyone makes typos and mistakes by accident, but it is about you to find and fix them before your teacher does. If you need help with an essay editing, try asking a friend or a family member to read and analyze your work. Also, you can order editing services in case your paper needs to be perfectly polished so that you can submit an ideal essay and get an excellent grade.

As these steps are simple to follow, you will not have any problems coping with an essay on time. Try the whole procedure at least once, and you will not have to use any other tips preparing an essay paper during your studies!

What is Upgma method in bioinformatics?

UPGMA (unweighted pair group method with arithmetic mean) is a simple agglomerative (bottom-up) hierarchical clustering method. The method is generally attributed to Sokal and Michener.

What is UPGMA in phylogenetic tree?

UPGMA (unweighted pair group method with arithmetic mean; Sokal and Michener 1958) is a straightforward approach to constructing a phylogenetic tree from a distance matrix. It is the only method of phylogenetic reconstruction dealt with in this chapter in which the resulting trees are rooted.

How do you do Upgma method?

This approach is simple, and can be boiled down to three simple steps: 1) Find the two organisms with least differences. 2) Group them together as one cluster and recalculate differences. 3) Repeat steps 1–2 until the tree is complete.

What is difference between UPGMA and NJ?

The Unweighted Pair-Group Method with Arithmetic Averaging (UPGMA) algorithm (left) assumes equal rates of evolution, so that branch tips come out equal. The Neighbor-Joining (NJ) (right) algorithm allows for unequal rates of evolution, so that branch lengths are proportional to amount of change.

What is the difference between UPGMA and Wpgma?

WPGMA is the same as UPGMA, except when shrinking the distance matrices, the new row and column values are no longer weighted by the number of taxa. Yes that’s right, Unweighted PGMA is based on weighted averages, and Weighted PGMA is based on unweighted averages. Good luck remembering this confusing difference!

What is the time complexity of UPGMA algorithm?

Complexity: The time and space complexity of UPGMA is O(n2), since there are n-1 iterations, with O(n) work in each one.

Why is UPGMA an unreliable method?

UPGMA is the simplest method for constructing trees. The great disadvantage of UPGMA is that it assumes the same evolutionary speed on all lineages, i.e. the rate of mutations is constant over time and for all lineages in the tree. This is called a ‘molecular clock hypothesis’.

What is the purpose of the phylogenetic tree?

A phylogenetic tree is a visual representation of the relationship between different organisms, showing the path through evolutionary time from a common ancestor to different descendants. Trees can represent relationships ranging from the entire history of life on earth, down to individuals in a population.

What is the difference between UPGMA and neighbor joining clustering methods?

The key difference between UPGMA and neighbor joining tree is the type of the phylogenetic tree resulting from each method. UPGMA is the technique of constructing a rooted phylogenetic tree while neighbor joining tree is the technique of constructing an unrooted phylogenetic tree.

Is a UPGMA tree rooted or unrooted?

Popular Answers (1) The most important practical issues: UPGMA provides rooted tree as a result, while NJ unrooted, and you have to take care proper rooting the NJ tree afterward.

Why is UPGMA unreliable?

The great disadvantage of UPGMA is that it assumes the same evolutionary speed on all lineages, i.e. the rate of mutations is constant over time and for all lineages in the tree. This is called a ‘molecular clock hypothesis’. This would mean that all leaves (terminal nodes) have the same distance from the root.

What is the UPGMA method?

The method is generally attributed to Sokal and Michener. The UPGMA method is similar to its weighted variant, the WPGMA method. Note that the unweighted term indicates that all distances contribute equally to each average that is computed and does not refer to the math by which it is achieved.

What is the constant substitution rate assumption in UPGMA?

UPGMA implicitly assumes a constant substitution rate, over time and phylogenetic lineages (known as the molecular clock hypothesis ). Since this assumption is often violated, this method is now rarely used.

What is UPGMA phylogenetic reconstruction?

UPGMA (unweighted pair group method with arithmetic mean; Sokal and Michener 1958) is a straightforward approach to constructing a phylogenetic tree from a distance matrix. It is the only method of phylogenetic reconstruction dealt with in this chapter in which the resulting trees are rooted.

How do you do UPGMA clustering?

In this example, the scale bar is shown on the right-hand side. Each round of UPGMA follows the same pattern. (1) Identify the shortest pairwise distance in the matrix. This identifies the two sequences to be clustered. (2) Join the two sequences identified. (3) The pair should be linked at a depth that is half of the shortest pairwise distance.